JGU WEKA REST Service


For developers
For end-users
Type:
Model generation tool, Trained model, Service
Categories:
API Definitions for OpenRiskNet applications and data, Processing and analysis
Applicability domain:
Computational modelling, Predictive toxicology
Topic:
Predictive modelling
Targeted industry:
Other consumer products
Targeted users:
Software Developers, Informed public, Researchers
Relevant OpenRiskNet case studies:
  • MetaP - Metabolism Prediction
  • ModelRX - Modelling for Prediction or Read Across

Provided by:
Johannes Gutenberg University Mainz
Contact:
Stefan Kramer
Licence:
GNU Lesser General Public License 3 (LGPLv3.0)
Login required:
No
Implementation status:
Available as web service, Containerised, API documentation available (Swagger-OpenAPI v2), Application programming interface available
Integration status:
Integrated application
Service integration operations completed:
Utilises the OpenRiskNet APIs to ensure that each service is accessible to our proposed interoperability layer.
Is annotated according to the semantic interoperability layer concept using defined ontologies.
Is containerised for easy deployment in virtual environments of OpenRiskNet instances.
Has documented scientific and technical background.
Is deployed into the OpenRiskNet reference environment.
Is listed in the OpenRiskNet discovery services.
Is listed in other central repositories like eInfraCentral, bio.tools and TeSS (ELIXIR).
Provides legal and ethical statements on how the service can be used.

Resources & Training

Presentation
WP2 Interoperability, Deployment and Security
13 Dec 2018
Additional materials:
WP2 presentation
Related services:
JGU WEKA REST Service

Open access: yes
Licence: Attribution-ShareAlike 4.0 International (CC BY-SA 4.0)
Organisations involved: CRG, EwC, Fraunhofer, IM, INERIS, JGU, NTUA, UM, UU, UoB, VU
Presentation
Presentation
WP4 Service Integration
13 Dec 2018
Additional materials:
WP4 presentation

Open access: yes
Licence: Attribution-ShareAlike 4.0 International (CC BY-SA 4.0)
Organisations involved: CRG, EwC, Fraunhofer, IM, INERIS, JGU, NTUA, UM, UU, UoB, VU
Presentation
Report
Initial API version provided to providers of services (Deliverable 2.2)
Rautenberg, Micha; Karwath, Andreas; Kramer, Stefan; Dudgeon, Tim; Spjuth, Ola; Bachler, Daniel; Exner, Thomas; Dokler, Joh; Sarimveis, Haralambos; Valsamis, Angelos; Doganis, Philip; Willighagen, Egon; Bois, Frederic
7 Nov 2018
Abstract:
This document reports the work towards the first version of the OpenRiskNet application programming interfaces (APIs) to be released to all partners of the consortium and associated partners for feedback and usage. Based on the diversity of the requirement foreseeable when developing the case studies to validate the infrastructure with real-world applications across all areas of predictive toxicology and risk assessment, a bottom-up approach to start with existing APIs and then harmonize them and bring them collectively to higher levels by integrating richer scientific annotation (semantic interoperability layer) was adopted in contrast to a top-down approach, where the API specification is defined by the consortium first and then all services have to be changed to comply to this specification.

Publisher: OpenRiskNet
Target audience: Developers, Software developers
Open access: yes
Licence: Attribution-ShareAlike 4.0 International (CC BY-SA 4.0)
Organisations involved: EwC, IM, INERIS, JGU, NTUA, UM, UU
Report
Public communication
OpenRiskNet Kicked off
Thomas Exner
24 Jan 2017
Abstract:
OpenRiskNet kicked off at Technology Park in Basel, Switzerland (on 15 and 16 December 2016). All partners were present on this two-day event.
Related services:
JGU WEKA REST Service

Publisher: OpenRiskNet
Target audience: OpenRiskNet stakeholders
Open access: yes
Licence: Attribution-ShareAlike 4.0 International (CC BY-SA 4.0)
Organisations involved: CRG, EwC, Fraunhofer, IM, INERIS, JGU, NTUA, UM, UU, UoB, VU
Public communication